fr.esrf.tangoatk.widget.attribute
Class NumberImageJViewer

java.lang.Object
  java.awt.Component
      java.awt.Container
          javax.swing.JComponent
              javax.swing.JPanel
                  fr.esrf.tangoatk.widget.attribute.NumberImageJViewer

All Implemented Interfaces:

IAttributeStateListener, IErrorListener, IImageListener, JDrawable, java.awt.event.ActionListener, java.awt.event.KeyListener, java.awt.event.MouseListener, java.awt.event.MouseMotionListener, java.awt.event.MouseWheelListener, java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable, java.util.EventListener, javax.accessibility.Accessible

public class NumberImageJViewer
extends javax.swing.JPanel
implements IImageListener, java.awt.event.MouseMotionListener, java.awt.event.MouseListener, java.awt.event.MouseWheelListener, java.awt.event.ActionListener, java.awt.event.KeyListener, JDrawable

A high level class to display a TANGO image and handle several image manipulation function.

See Also:

Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class javax.swing.JPanel

javax.swing.JPanel.AccessibleJPanel

Nested classes/interfaces inherited from class javax.swing.JComponent

javax.swing.JComponent.AccessibleJComponent

Nested classes/interfaces inherited from class java.awt.Container

java.awt.Container.AccessibleAWTContainer

Nested classes/interfaces inherited from class java.awt.Component

java.awt.Component.AccessibleAWTComponent, java.awt.Component.BltBufferStrategy, java.awt.Component.FlipBufferStrategy

Field Summary

protected LabelViewer	attNameLabel
protected boolean	autoBestFit
protected javax.swing.JCheckBox	autoBestFitCheck
protected double	autoBfMax
protected double	autoBfMin
protected boolean	autoZoom
protected javax.swing.JLabel	avgLabel
protected javax.swing.JButton	axisButton
protected javax.swing.JButton	axisCloseButton
protected javax.swing.JDialog	axisDialog
protected javax.swing.JCheckBox	bestFitCheck
protected javax.swing.JCheckBoxMenuItem	bestFitMenuItem
protected double	bfa0
protected double	bfa1
protected double	bfMax
protected double	bfMin
protected javax.swing.JPanel	buttonPanel
protected javax.swing.JScrollPane	buttonView
protected javax.swing.JButton	cancelButton
protected javax.swing.JPanel	cfgPanel
protected double	curSelMax
protected double	curSelMin
protected javax.swing.JCheckBoxMenuItem	displayLogMenuItem
protected double[][]	doubleValues
protected javax.swing.JButton	fileButton
protected javax.swing.JMenuItem	fileMenuItem
protected boolean	firstRefresh
protected Gradient	gColor
protected int[]	gColormap
protected javax.swing.JButton	gradButton
protected JGradientViewer	gradientTool
protected javax.swing.JLabel	gradLabel
protected JGradientEditor	gradViewer
protected javax.swing.JButton	histoButton
protected javax.swing.JMenuItem	histogramMenuItem
protected JImageJ	imagePanel
protected javax.swing.JComboBox	imageSizeCombo
protected javax.swing.JLabel	imageSizeLabel
protected javax.swing.JPopupMenu	imgMenu
protected javax.swing.JMenuItem	infoMenuItem
protected javax.swing.JMenuItem	innerRoiColorMenuItem
protected boolean	isBestFit
protected boolean	isNegative
protected int	iSz
protected java.lang.String	lastConfig
protected javax.swing.filechooser.FileFilter	lastFileFilter
protected java.lang.String	lastSnapshotLocation
protected javax.swing.JMenuItem	lineProfileMenuItem
protected LineProfilerViewer	lineProfiler
protected javax.swing.event.EventListenerList	listenerList
protected javax.swing.JButton	loadButton
protected javax.swing.JMenuItem	loadMenuItem
protected boolean	logValues
protected javax.swing.JLabel	maxBestFitLabel
protected javax.swing.JTextField	maxBestFitText
protected javax.swing.JLabel	minBestFitLabel
protected javax.swing.JTextField	minBestFitText
protected INumberImage	model
protected javax.swing.JCheckBox	negativeCheck
protected javax.swing.JCheckBoxMenuItem	negativeMenuItem
protected java.awt.Insets	noMargin
protected javax.swing.JButton	okButton
protected java.awt.Rectangle	oldSelection
protected javax.swing.JMenuItem	outerRoiColorMenuItem
protected java.awt.Font	panelFont
protected javax.swing.JButton	printButton
protected javax.swing.JMenuItem	printMenuItem
protected javax.swing.JButton	profileButton
protected int	profileMode
protected javax.swing.JButton	propButton
protected javax.swing.JLabel	rangeLabel
protected javax.swing.JMenuItem	roiColorMenuItem
protected javax.swing.JButton	roiColorsButton
protected javax.swing.JPopupMenu	roiColorsMenu
protected javax.swing.JButton	saveButton
protected javax.swing.JMenuItem	saveDataFileMenuItem
protected javax.swing.JMenuItem	saveMenuItem
protected javax.swing.JButton	selectButton
protected javax.swing.JMenuItem	selectedInnerRoiColorMenuItem
protected javax.swing.JMenuItem	selectedOuterRoiColorMenuItem
protected javax.swing.JMenuItem	selectedRoiColorMenuItem
protected javax.swing.JMenuItem	selectionColorMenuItem
protected javax.swing.JMenuItem	selectionMaxMenuItem
protected javax.swing.JMenuItem	selectionMenuItem
protected javax.swing.JButton	selectMaxButton
protected javax.swing.JLabel	selLabel
protected javax.swing.JTextField	selText
protected javax.swing.JButton	settingsButton
protected javax.swing.JDialog	settingsDialog
protected javax.swing.JMenuItem	settingsMenuItem
protected javax.swing.JPanel	settingsPanel
protected javax.swing.JCheckBoxMenuItem	showGradMenuItem
protected boolean	showingMenu
protected boolean	sigHistogram
protected javax.swing.JCheckBox	sigHistogramCheck
protected int	startHisto
protected javax.swing.JLabel	statusLabel
protected javax.swing.JCheckBoxMenuItem	statusLineMenuItem
protected javax.swing.JButton	tableButton
protected javax.swing.JFrame	tableDialog
protected javax.swing.JMenuItem	tableMenuItem
protected JTableRow	tablePanel
protected javax.swing.JTabbedPane	tabPane
protected javax.swing.JCheckBoxMenuItem	toolbarMenuItem
protected boolean	userZoom
protected int	verticalExtent
protected AxisPanel	xAxisPanel
protected AxisPanel	yAxisPanel
protected javax.swing.JButton	zoomButton
protected javax.swing.JPanel	zoomCfgPanel
protected javax.swing.JComboBox	zoomCombo
protected javax.swing.JFrame	zoomDialog
protected int	zoomFactor
protected JImage	zoomImage
protected javax.swing.JMenuItem	zoomMenuItem
protected javax.swing.JPanel	zoomPanel
protected javax.swing.JLabel	zoomText
protected javax.swing.JScrollPane	zoomView
protected int	zoomXOrg
protected int	zoomYOrg

Fields inherited from class javax.swing.JComponent

accessibleContext, TOOL_TIP_TEXT_KEY, ui, UNDEFINED_CONDITION, WHEN_ANCESTOR_OF_FOCUSED_COMPONENT, WHEN_FOCUSED, WHEN_IN_FOCUSED_WINDOW

Fields inherited from class java.awt.Component

BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Constructor Summary

NumberImageJViewer()
Create a new NumberImageViewer

Method Summary

void	actionPerformed(java.awt.event.ActionEvent evt)
void	addRoiListener(IRoiListener l)
protected void	adjustToolbarSize()
protected void	applySettings()
protected java.lang.String	applySettings(CfFileReader f)
protected int	bestFit(double v)
protected double[]	buildHistogramData()
protected double[]	buildProfileData()
protected boolean	buildTable()
protected boolean	buildZoom()
protected void	changeExteriorROIColor()
protected void	changeExteriorROISelectionColor()
protected void	changeInteriorROIColor()
protected void	changeInteriorROISelectionColor()
protected void	changeROIColor()
protected void	changeROISelectionColor()
void	clearModel() Removes all listener belonging to the viewer.
protected void	computeAutoZoom()
protected double[][]	computeLog(double[][] values)
protected void	computeVerticalExtent()
protected void	constructLineProfiler()
protected void	constructSettingsPanel()
protected void	constructTablePanel()
protected void	constructZoomPanel()
protected void	convertImage()
void	errorChange(ErrorEvent errorEvent)
void	fireRoiChange()
protected void	freePopup()
protected java.awt.image.BufferedImage	get8BitImage()
boolean	getAutoZoom() Determines wheter this image viewer has auto zoom enabled.
double	getBestFitMax() Returns current best fit max value (user value)
double	getBestFitMin() Returns current best fit min value (user value)
javax.swing.JComponent	getComponent() Returns the JComponent that implements this interface.
java.awt.Dimension	getCurrentImageSize() Returns the current image size
double[][]	getData(ij.gui.Roi roi)
double[][]	getData(ij.gui.Roi roi, double[][] imageData, boolean innerRoi)
java.lang.String	getDescription(java.lang.String name) Get a description of this extensions.
java.lang.String	getExtendedParam(java.lang.String name) Returns the specified parameter value.
protected java.lang.String	getExtension(java.io.File f) getExtension returns the extension of a given file, that is the part after the last `.' in the filename.
java.lang.String[]	getExtensionList() Returns list of extension name for this objects (Empty array for none).
Gradient	getGradient() Returns current colormap
JLAxis	getGradientAxis() Returna handle to the Gradient axis.
java.awt.Insets	getImageMargin() Returns image margin.
JImageJ	getImagePanel()
int	getImageXCoord(int x) Converts the component horizontal coordinate to the image coordinate.
int	getImageYCoord(int y) Converts the component vertical coordinate to the image coordinate.
protected java.lang.String	getLabelInfoString()
INumberImage	getModel()
java.awt.Rectangle	getSelection() Return current floating rectangle selection
java.lang.String	getSettings() returns the configuration as string.
JLAxis	getXAxis() Returns a handle to the x axis.
JLAxis	getYAxis() Return a handle to the Y axis.
int	getZoom() Return the current zoom factor index.
void	imageChange(NumberImageEvent evt)
protected void	initButtonPanel()
void	initForEditing() Call after a component of a JDSwingObject is created, this give a default look and feel for editing.
protected void	initGradient()
protected void	initImagePanel()
protected void	initPopupMenu()
protected void	initStatusLine()
boolean	isAutoBestFit() Returns true when automatic best fit is enabled
boolean	isBestFit() Returns true when best fit is on
boolean	isGradientVisible() Returns true when the gradient is visible.
boolean	isLogValues()
boolean	isNegative() Returns true only if negative image is displayed
boolean	isShowingMenu() Returns true is the image viewer menu is displayed when clicking on the right mouse button.
boolean	isStatusLineVisible() Returns true when the status line is visible.
boolean	isToolbarVisible() Returns true when the toolbar is visible.
void	keyPressed(java.awt.event.KeyEvent e)
void	keyReleased(java.awt.event.KeyEvent e)
void	keyTyped(java.awt.event.KeyEvent e)
protected void	loadButtonActionPerformed()
void	loadImage(java.lang.String fileName) Load an image (gif,jpg or png) into the viewer.
java.lang.String	loadSetting(java.lang.String filename) Load NumberImageViewer settings.
static void	main(java.lang.String[] args)
void	mouseClicked(java.awt.event.MouseEvent e)
void	mouseDragged(java.awt.event.MouseEvent e)
void	mouseEntered(java.awt.event.MouseEvent e)
void	mouseExited(java.awt.event.MouseEvent e)
void	mouseMoved(java.awt.event.MouseEvent e)
void	mousePressed(java.awt.event.MouseEvent e)
void	mouseReleased(java.awt.event.MouseEvent e)
void	mouseWheelMoved(java.awt.event.MouseWheelEvent e)
protected void	preComputeBestFit()
void	printImage() Prints out this image.
protected void	refreshComponents()
protected void	refreshLineProfile()
protected void	refreshSelectionMinMax()
protected void	refreshStatusLine()
void	removeRoiListener(IRoiListener l)
protected void	saveButtonActionPerformed()
protected void	saveEdf(java.lang.String filename)
protected void	saveFile()
void	saveSetting(java.lang.String filename) Save settings.
protected void	selectionChanged()
void	setAutoBestFit(boolean b) Sets the auto Best fit mode.
void	setAutoZoom(boolean auto) Enables or disables the auto zoom.
void	setBestFit(boolean b) Displays the image using the whole color range.
void	setBestFitMinMax(double min, double max) Sets the value of best fit min and max when automatic best fit is off.
void	setData(double[][] v) Sets data to display.
boolean	setExtendedParam(java.lang.String name, java.lang.String value, boolean popupErr) Sets the specified param.
void	setGradient(Gradient g) Sets the colormap
void	setGradientVisible(boolean b) Displays or hides the gradient (right panel).
void	setImageMargin(java.awt.Insets i) Sets the image margin.
void	setLogValues(boolean logValues)
void	setModel(INumberImage v) setModel Set the model.
void	setNegative(boolean b) Displays negative image when enabled
void	setSelection(java.awt.Rectangle r) Sets the floating selection.
void	setShowingMenu(boolean b) True to enable menu displayed when clicking on right mouse button.
void	setStatusLineVisible(boolean b) Displays or hides the status line (bottom panel).
void	setToolbarVisible(boolean b) Displays or hides the toolbar.
void	setVerticalExtent(int ratio) Extend verticaly the image.
void	setZoom(int zoomIndex) Sets the image zoom factor (does not affect the zoom dialog).
protected void	showAxisDialog()
protected void	showGradientEditor()
protected void	showJdrawError(boolean popup, java.lang.String paramName, java.lang.String message)
protected void	showPropertyFrame()
protected void	showSettings()
protected void	showTable()
protected void	showZoom()
void	stateChange(AttributeStateEvent evt)

Methods inherited from class javax.swing.JPanel

getAccessibleContext, getUI, getUIClassID, paramString, setUI, updateUI

Methods inherited from class javax.swing.JComponent

addAncestorListener, addNotify, addVetoableChangeListener, computeVisibleRect, contains, createToolTip, disable, enable, firePropertyChange, firePropertyChange, firePropertyChange, fireVetoableChange, getActionForKeyStroke, getActionMap, getAlignmentX, getAlignmentY, getAncestorListeners, getAutoscrolls, getBorder, getBounds, getClientProperty, getComponentGraphics, getComponentPopupMenu, getConditionForKeyStroke, getDebugGraphicsOptions, getDefaultLocale, getFontMetrics, getGraphics, getHeight, getInheritsPopupMenu, getInputMap, getInputMap, getInputVerifier, getInsets, getInsets, getListeners, getLocation, getMaximumSize, getMinimumSize, getNextFocusableComponent, getPopupLocation, getPreferredSize, getRegisteredKeyStrokes, getRootPane, getSize, getToolTipLocation, getToolTipText, getToolTipText, getTopLevelAncestor, getTransferHandler, getVerifyInputWhenFocusTarget, getVetoableChangeListeners, getVisibleRect, getWidth, getX, getY, grabFocus, isDoubleBuffered, isLightweightComponent, isManagingFocus, isOpaque, isOptimizedDrawingEnabled, isPaintingTile, isRequestFocusEnabled, isValidateRoot, paint, paintBorder, paintChildren, paintComponent, paintImmediately, paintImmediately, print, printAll, printBorder, printChildren, printComponent, processComponentKeyEvent, processKeyBinding, processKeyEvent, processMouseEvent, processMouseMotionEvent, putClientProperty, registerKeyboardAction, registerKeyboardAction, removeAncestorListener, removeNotify, removeVetoableChangeListener, repaint, repaint, requestDefaultFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, resetKeyboardActions, reshape, revalidate, scrollRectToVisible, setActionMap, setAlignmentX, setAlignmentY, setAutoscrolls, setBackground, setBorder, setComponentPopupMenu, setDebugGraphicsOptions, setDefaultLocale, setDoubleBuffered, setEnabled, setFocusTraversalKeys, setFont, setForeground, setInheritsPopupMenu, setInputMap, setInputVerifier, setMaximumSize, setMinimumSize, setNextFocusableComponent, setOpaque, setPreferredSize, setRequestFocusEnabled, setToolTipText, setTransferHandler, setUI, setVerifyInputWhenFocusTarget, setVisible, unregisterKeyboardAction, update

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, addImpl, addPropertyChangeListener, addPropertyChangeListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalKeys, getFocusTraversalPolicy, getLayout, getMousePosition, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, printComponents, processContainerEvent, processEvent, remove, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusCycleRoot, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setLayout, transferFocusBackward, transferFocusDownCycle, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, createImage, createImage, createVolatileImage, createVolatileImage, disableEvents, dispatchEvent, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBackground, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusCycleRootAncestor, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getForeground, getGraphicsConfiguration, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputContext, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocale, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPeer, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getToolkit, getTreeLock, gotFocus, handleEvent, hasFocus, hide, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isShowing, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, postEvent, prepareImage, prepareImage, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, resize, resize, setBounds, setBounds, setComponentOrientation, setCursor, setDropTarget, setFocusable, setFocusTraversalKeysEnabled, setIgnoreRepaint, setLocale, setLocation, setLocation, setName, setSize, setSize, show, show, size, toString, transferFocus, transferFocusUpCycle

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

model

protected INumberImage model

doubleValues

protected double[][] doubleValues

oldSelection

protected java.awt.Rectangle oldSelection

profileMode

protected int profileMode

showingMenu

protected boolean showingMenu

sigHistogram

protected boolean sigHistogram

isNegative

protected boolean isNegative

startHisto

protected int startHisto

gColor

protected Gradient gColor

gColormap

protected int[] gColormap

iSz

protected int iSz

listenerList

protected javax.swing.event.EventListenerList listenerList

noMargin

protected java.awt.Insets noMargin

autoZoom

protected boolean autoZoom

firstRefresh

protected boolean firstRefresh

userZoom

protected boolean userZoom

verticalExtent

protected int verticalExtent

lastConfig

protected java.lang.String lastConfig

isBestFit

protected boolean isBestFit

autoBestFit

protected boolean autoBestFit

bfMin

protected double bfMin

bfMax

protected double bfMax

autoBfMin

protected double autoBfMin

autoBfMax

protected double autoBfMax

bfa0

protected double bfa0

bfa1

protected double bfa1

curSelMin

protected double curSelMin

curSelMax

protected double curSelMax

imagePanel

protected JImageJ imagePanel

buttonPanel

protected javax.swing.JPanel buttonPanel

selectButton

protected javax.swing.JButton selectButton

selectMaxButton

protected javax.swing.JButton selectMaxButton

roiColorsButton

protected javax.swing.JButton roiColorsButton

roiColorsMenu

protected javax.swing.JPopupMenu roiColorsMenu

roiColorMenuItem

protected javax.swing.JMenuItem roiColorMenuItem

selectedRoiColorMenuItem

protected javax.swing.JMenuItem selectedRoiColorMenuItem

innerRoiColorMenuItem

protected javax.swing.JMenuItem innerRoiColorMenuItem

selectedInnerRoiColorMenuItem

protected javax.swing.JMenuItem selectedInnerRoiColorMenuItem

outerRoiColorMenuItem

protected javax.swing.JMenuItem outerRoiColorMenuItem

selectedOuterRoiColorMenuItem

protected javax.swing.JMenuItem selectedOuterRoiColorMenuItem

fileButton

protected javax.swing.JButton fileButton

zoomButton

protected javax.swing.JButton zoomButton

tableButton

protected javax.swing.JButton tableButton

profileButton

protected javax.swing.JButton profileButton

histoButton

protected javax.swing.JButton histoButton

settingsButton

protected javax.swing.JButton settingsButton

axisButton

protected javax.swing.JButton axisButton

loadButton

protected javax.swing.JButton loadButton

saveButton

protected javax.swing.JButton saveButton

printButton

protected javax.swing.JButton printButton

buttonView

protected javax.swing.JScrollPane buttonView

panelFont

protected java.awt.Font panelFont

cfgPanel

protected javax.swing.JPanel cfgPanel

statusLabel

protected javax.swing.JLabel statusLabel

rangeLabel

protected javax.swing.JLabel rangeLabel

avgLabel

protected javax.swing.JLabel avgLabel

selLabel

protected javax.swing.JLabel selLabel

selText

protected javax.swing.JTextField selText

imgMenu

protected javax.swing.JPopupMenu imgMenu

infoMenuItem

protected javax.swing.JMenuItem infoMenuItem

bestFitMenuItem

protected javax.swing.JCheckBoxMenuItem bestFitMenuItem

negativeMenuItem

protected javax.swing.JCheckBoxMenuItem negativeMenuItem

toolbarMenuItem

protected javax.swing.JCheckBoxMenuItem toolbarMenuItem

statusLineMenuItem

protected javax.swing.JCheckBoxMenuItem statusLineMenuItem

showGradMenuItem

protected javax.swing.JCheckBoxMenuItem showGradMenuItem

selectionMenuItem

protected javax.swing.JMenuItem selectionMenuItem

selectionMaxMenuItem

protected javax.swing.JMenuItem selectionMaxMenuItem

selectionColorMenuItem

protected javax.swing.JMenuItem selectionColorMenuItem

fileMenuItem

protected javax.swing.JMenuItem fileMenuItem

zoomMenuItem

protected javax.swing.JMenuItem zoomMenuItem

tableMenuItem

protected javax.swing.JMenuItem tableMenuItem

lineProfileMenuItem

protected javax.swing.JMenuItem lineProfileMenuItem

histogramMenuItem

protected javax.swing.JMenuItem histogramMenuItem

settingsMenuItem

protected javax.swing.JMenuItem settingsMenuItem

loadMenuItem

protected javax.swing.JMenuItem loadMenuItem

saveMenuItem

protected javax.swing.JMenuItem saveMenuItem

saveDataFileMenuItem

protected javax.swing.JMenuItem saveDataFileMenuItem

printMenuItem

protected javax.swing.JMenuItem printMenuItem

displayLogMenuItem

protected javax.swing.JCheckBoxMenuItem displayLogMenuItem

gradientTool

protected JGradientViewer gradientTool

lineProfiler

protected LineProfilerViewer lineProfiler

zoomDialog

protected javax.swing.JFrame zoomDialog

zoomPanel

protected javax.swing.JPanel zoomPanel

zoomView

protected javax.swing.JScrollPane zoomView

zoomImage

protected JImage zoomImage

zoomCfgPanel

protected javax.swing.JPanel zoomCfgPanel

zoomCombo

protected javax.swing.JComboBox zoomCombo

zoomFactor

protected int zoomFactor

zoomXOrg

protected int zoomXOrg

zoomYOrg

protected int zoomYOrg

zoomText

protected javax.swing.JLabel zoomText

settingsDialog

protected javax.swing.JDialog settingsDialog

settingsPanel

protected javax.swing.JPanel settingsPanel

attNameLabel

protected LabelViewer attNameLabel

propButton

protected javax.swing.JButton propButton

sigHistogramCheck

protected javax.swing.JCheckBox sigHistogramCheck

bestFitCheck

protected javax.swing.JCheckBox bestFitCheck

autoBestFitCheck

protected javax.swing.JCheckBox autoBestFitCheck

minBestFitLabel

protected javax.swing.JLabel minBestFitLabel

minBestFitText

protected javax.swing.JTextField minBestFitText

maxBestFitLabel

protected javax.swing.JLabel maxBestFitLabel

maxBestFitText

protected javax.swing.JTextField maxBestFitText

negativeCheck

protected javax.swing.JCheckBox negativeCheck

imageSizeCombo

protected javax.swing.JComboBox imageSizeCombo

imageSizeLabel

protected javax.swing.JLabel imageSizeLabel

gradViewer

protected JGradientEditor gradViewer

gradButton

protected javax.swing.JButton gradButton

gradLabel

protected javax.swing.JLabel gradLabel

okButton

protected javax.swing.JButton okButton

cancelButton

protected javax.swing.JButton cancelButton

axisDialog

protected javax.swing.JDialog axisDialog

tabPane

protected javax.swing.JTabbedPane tabPane

xAxisPanel

protected AxisPanel xAxisPanel

yAxisPanel

protected AxisPanel yAxisPanel

axisCloseButton

protected javax.swing.JButton axisCloseButton

tableDialog

protected javax.swing.JFrame tableDialog

tablePanel

protected JTableRow tablePanel

lastSnapshotLocation

protected java.lang.String lastSnapshotLocation

lastFileFilter

protected javax.swing.filechooser.FileFilter lastFileFilter

logValues

protected boolean logValues

Constructor Detail

NumberImageJViewer

public NumberImageJViewer()

Create a new NumberImageViewer

Method Detail

initImagePanel

protected void initImagePanel()

initButtonPanel

protected void initButtonPanel()

initGradient

protected void initGradient()

initStatusLine

protected void initStatusLine()

initPopupMenu

protected void initPopupMenu()

initForEditing

public void initForEditing()

Description copied from interface: JDrawable

Call after a component of a JDSwingObject is created, this give a default look and feel for editing.

Specified by:

initForEditing in interface JDrawable

getComponent

public javax.swing.JComponent getComponent()

Description copied from interface: JDrawable

Returns the JComponent that implements this interface.

Specified by:

getComponent in interface JDrawable

getDescription

public java.lang.String getDescription(java.lang.String name)

Description copied from interface: JDrawable

Get a description of this extensions.

Specified by:

getDescription in interface JDrawable

Parameters:

name - Extension name

Returns:

Empty string for no description.

getExtensionList

public java.lang.String[] getExtensionList()

Description copied from interface: JDrawable

Returns list of extension name for this objects (Empty array for none).

Specified by:

getExtensionList in interface JDrawable

setExtendedParam

public boolean setExtendedParam(java.lang.String name,
                                java.lang.String value,
                                boolean popupErr)

Description copied from interface: JDrawable

Sets the specified param.

Specified by:

setExtendedParam in interface JDrawable

Parameters:

name - Parameter name (Case unsensitive).

value - Parameter value.

popupErr - true when the JDrawable should display a popup if the parameter value is incorrect, false otherwise. Note that the JDrawable must not display an error message if the parameter does not exists even if popupAllowed is true.

Returns:

true if parameters has been succesfully applied, false otherwise.

getExtendedParam

public java.lang.String getExtendedParam(java.lang.String name)

Description copied from interface: JDrawable

Returns the specified parameter value.

Specified by:

getExtendedParam in interface JDrawable

Parameters:

name - Param name (Case unsensitive).

Returns:

Empty string if not exists, the value otherwise.

showJdrawError

protected void showJdrawError(boolean popup,
                              java.lang.String paramName,
                              java.lang.String message)

addRoiListener

public void addRoiListener(IRoiListener l)

removeRoiListener

public void removeRoiListener(IRoiListener l)

fireRoiChange

public void fireRoiChange()

setBestFit

public void setBestFit(boolean b)

Displays the image using the whole color range.

Parameters:

b - Best fit toggle

isBestFit

public boolean isBestFit()

Returns true when best fit is on

Returns:

Best fit state

setAutoBestFit

public void setAutoBestFit(boolean b)

Sets the auto Best fit mode. Computes maximum and minimum value of the image when enabled else uses the min and max best fit user values.

Parameters:

b - True to enable auto best fit

isAutoBestFit

public boolean isAutoBestFit()

Returns true when automatic best fit is enabled

Returns:

Auto best fit state

setBestFitMinMax

public void setBestFitMinMax(double min,
                             double max)

Sets the value of best fit min and max when automatic best fit is off.

Parameters:

min - Minimum value

max - Maximum value

getBestFitMin

public double getBestFitMin()

Returns current best fit min value (user value)

Returns:

Minimum value

getBestFitMax

public double getBestFitMax()

Returns current best fit max value (user value)

Returns:

Maximum value

setGradient

public void setGradient(Gradient g)

Sets the colormap

Parameters:

g - New gradient colormap

getGradient

public Gradient getGradient()

Returns current colormap

Returns:

Gradient object

setNegative

public void setNegative(boolean b)

Displays negative image when enabled

Parameters:

b - True for negtive image

isNegative

public boolean isNegative()

Returns true only if negative image is displayed

Returns:

True when negative

setToolbarVisible

public void setToolbarVisible(boolean b)

Displays or hides the toolbar.

Parameters:

b - True if toolbar is displayed

isToolbarVisible

public boolean isToolbarVisible()

Returns true when the toolbar is visible.

Returns:

Toolbar visible state

setStatusLineVisible

public void setStatusLineVisible(boolean b)

Displays or hides the status line (bottom panel).

Parameters:

b - True if status line is displayed

isStatusLineVisible

public boolean isStatusLineVisible()

Returns true when the status line is visible.

Returns:

Status line visible state

setGradientVisible

public void setGradientVisible(boolean b)

Displays or hides the gradient (right panel).

Parameters:

b - True if status line is displayed

isGradientVisible

public boolean isGradientVisible()

Returns true when the gradient is visible.

setShowingMenu

public void setShowingMenu(boolean b)

True to enable menu displayed when clicking on right mouse button.

Parameters:

b - True to enable the menu

setZoom

public void setZoom(int zoomIndex)

Sets the image zoom factor (does not affect the zoom dialog). If you want to start you viewer with a fixed zoom factor, you have to call setZoom() before setModel().

 Possible zoomIndex values are:
   0 : 800%
   1 : 400%
   2 : 200%
   3 : 100%
   4 : 50%
   5 : 25%
   6 : 12.5%
 

Parameters:

zoomIndex - ZoomFactor index (see description).

getZoom

public int getZoom()

Return the current zoom factor index.

See Also:

setZoom(int)

setAutoZoom

public void setAutoZoom(boolean auto)

Enables or disables the auto zoom. When enabled, the image size (zoom) is automatically adjusted according to the component size. The calcul of the size is triggered by a call to setData() or imageChange().

Parameters:

auto - AutoZoom flag

getAutoZoom

public boolean getAutoZoom()

Determines wheter this image viewer has auto zoom enabled.

See Also:

setAutoZoom(boolean)

isShowingMenu

public boolean isShowingMenu()

Returns true is the image viewer menu is displayed when clicking on the right mouse button.

Returns:

True is menu is enabled

getImageMargin

public java.awt.Insets getImageMargin()

Returns image margin.

Returns:

Mergin

setImageMargin

public void setImageMargin(java.awt.Insets i)

Sets the image margin.

Parameters:

i - Image margin

getCurrentImageSize

public java.awt.Dimension getCurrentImageSize()

Returns the current image size

Returns:

Current image size

setSelection

public void setSelection(java.awt.Rectangle r)

Sets the floating selection.

Parameters:

r - Rectangle to select

getSelection

public java.awt.Rectangle getSelection()

Return current floating rectangle selection

Returns:

Selection rectangle, Null is returned when nothing is selected.

setData

public void setData(double[][] v)

Sets data to display.

Parameters:

v - Handle to data

loadImage

public void loadImage(java.lang.String fileName)
               throws java.io.IOException

Load an image (gif,jpg or png) into the viewer. For color image the green field is taken.

Parameters:

fileName - File to be loaded

Throws:

java.io.IOException - Exception thrown in case of failure

getImagePanel

public JImageJ getImagePanel()

Returns:

the imagePanel

getXAxis

public JLAxis getXAxis()

Returns a handle to the x axis.

getYAxis

public JLAxis getYAxis()

Return a handle to the Y axis.

getGradientAxis

public JLAxis getGradientAxis()

Returna handle to the Gradient axis.

getImageXCoord

public int getImageXCoord(int x)

Converts the component horizontal coordinate to the image coordinate.

Parameters:

x - Component horizontal coordinate

getImageYCoord

public int getImageYCoord(int y)

Converts the component vertical coordinate to the image coordinate.

Parameters:

y - Component vertical coordinate

setVerticalExtent

public void setVerticalExtent(int ratio)

Extend verticaly the image.

Parameters:

ratio - Vertical extent ration

adjustToolbarSize

protected void adjustToolbarSize()

freePopup

protected void freePopup()

buildProfileData

protected double[] buildProfileData()

buildHistogramData

protected double[] buildHistogramData()

refreshLineProfile

protected void refreshLineProfile()

refreshSelectionMinMax

protected void refreshSelectionMinMax()

refreshComponents

protected void refreshComponents()

selectionChanged

protected void selectionChanged()

refreshStatusLine

protected void refreshStatusLine()

showZoom

protected void showZoom()

applySettings

protected void applySettings()

saveSetting

public void saveSetting(java.lang.String filename)

Save settings.

Parameters:

filename - file to be saved.

getSettings

public java.lang.String getSettings()

returns the configuration as string.

See Also:

saveSetting(java.lang.String)

loadSetting

public java.lang.String loadSetting(java.lang.String filename)

Load NumberImageViewer settings.

Parameters:

filename - file to be read

Returns:

An error string or An empty string when succes

applySettings

protected java.lang.String applySettings(CfFileReader f)

saveButtonActionPerformed

protected void saveButtonActionPerformed()

loadButtonActionPerformed

protected void loadButtonActionPerformed()

showAxisDialog

protected void showAxisDialog()

showSettings

protected void showSettings()

getData

public double[][] getData(ij.gui.Roi roi)

getData

public double[][] getData(ij.gui.Roi roi,
                          double[][] imageData,
                          boolean innerRoi)

buildTable

protected boolean buildTable()

showTable

protected void showTable()

showPropertyFrame

protected void showPropertyFrame()

showGradientEditor

protected void showGradientEditor()

constructLineProfiler

protected void constructLineProfiler()

constructTablePanel

protected void constructTablePanel()

constructZoomPanel

protected void constructZoomPanel()

constructSettingsPanel

protected void constructSettingsPanel()

getExtension

protected java.lang.String getExtension(java.io.File f)

getExtension returns the extension of a given file, that is the part after the last `.' in the filename.

Parameters:

f - a File value

Returns:

a String value

actionPerformed

public void actionPerformed(java.awt.event.ActionEvent evt)

Specified by:

actionPerformed in interface java.awt.event.ActionListener

mouseDragged

public void mouseDragged(java.awt.event.MouseEvent e)

Specified by:

mouseDragged in interface java.awt.event.MouseMotionListener

mouseMoved

public void mouseMoved(java.awt.event.MouseEvent e)

Specified by:

mouseMoved in interface java.awt.event.MouseMotionListener

mouseEntered

public void mouseEntered(java.awt.event.MouseEvent e)

Specified by:

mouseEntered in interface java.awt.event.MouseListener

mouseExited

public void mouseExited(java.awt.event.MouseEvent e)

Specified by:

mouseExited in interface java.awt.event.MouseListener

mouseClicked

public void mouseClicked(java.awt.event.MouseEvent e)

Specified by:

mouseClicked in interface java.awt.event.MouseListener

mouseReleased

public void mouseReleased(java.awt.event.MouseEvent e)

Specified by:

mouseReleased in interface java.awt.event.MouseListener

mousePressed

public void mousePressed(java.awt.event.MouseEvent e)

Specified by:

mousePressed in interface java.awt.event.MouseListener

mouseWheelMoved

public void mouseWheelMoved(java.awt.event.MouseWheelEvent e)

Specified by:

mouseWheelMoved in interface java.awt.event.MouseWheelListener

keyPressed

public void keyPressed(java.awt.event.KeyEvent e)

Specified by:

keyPressed in interface java.awt.event.KeyListener

keyTyped

public void keyTyped(java.awt.event.KeyEvent e)

Specified by:

keyTyped in interface java.awt.event.KeyListener

keyReleased

public void keyReleased(java.awt.event.KeyEvent e)

Specified by:

keyReleased in interface java.awt.event.KeyListener

errorChange

public void errorChange(ErrorEvent errorEvent)

Specified by:

errorChange in interface IErrorListener

stateChange

public void stateChange(AttributeStateEvent evt)

Specified by:

stateChange in interface IAttributeStateListener

imageChange

public void imageChange(NumberImageEvent evt)

Specified by:

imageChange in interface IImageListener

setModel

public void setModel(INumberImage v)

setModel Set the model.

Parameters:

v - Value to assign to model. This image must have a height equals to 2.

getModel

public INumberImage getModel()

clearModel

public void clearModel()

Removes all listener belonging to the viewer.

saveEdf

protected void saveEdf(java.lang.String filename)

getLabelInfoString

protected java.lang.String getLabelInfoString()

computeVerticalExtent

protected void computeVerticalExtent()

computeAutoZoom

protected void computeAutoZoom()

preComputeBestFit

protected void preComputeBestFit()

bestFit

protected int bestFit(double v)

buildZoom

protected boolean buildZoom()

saveFile

protected void saveFile()

get8BitImage

protected java.awt.image.BufferedImage get8BitImage()

convertImage

protected void convertImage()

printImage

public void printImage()

Prints out this image.

isLogValues

public boolean isLogValues()

Returns:

the logValues

setLogValues

public void setLogValues(boolean logValues)

Parameters:

logValues - the logValues to set

computeLog

protected double[][] computeLog(double[][] values)

changeROIColor

protected void changeROIColor()

changeROISelectionColor

protected void changeROISelectionColor()

changeInteriorROIColor

protected void changeInteriorROIColor()

changeInteriorROISelectionColor

protected void changeInteriorROISelectionColor()

changeExteriorROIColor

protected void changeExteriorROIColor()

changeExteriorROISelectionColor

protected void changeExteriorROISelectionColor()

main

public static void main(java.lang.String[] args)