There are two systems for data processing on the Structural Biology beamlines:
a) Grenoble Automatic Data procEssing (GrenADES)
b) EDNA framework Fast Processing System (EDNA Autoprocessing)
PROCESSED_DATA/your_image_directory_name/xds_your_run/xds_parallelproc: top level directory for full autoprocessing. XDS files from the indexing run are kept here
PROCESSED_DATA /your_image_directory_name/xds_your_run/xds_parallelproc/SGnumber_unit_cell_dimensions : Directory for a given space group. there are usually many of these off of the top level directory
The EDNA automatic data processing is started automatically by mxCuBE when data is collected.
The processing is designed to be quick and uses a sequence of XDS, XSCALE, Pointless, Aimless, Truncate and Uniquify built within the EDNA framework. XSCALE is run to produced merge and unmerged data with and without anomalous ON.
If a space group and a unit cell are provided in ISPyB and/or provided in mxCuBE, the integration will use this information.
Results of the fast processing can be found in ./PROCESSED_DATA/xds_prefix_run1_1/results/fast_processing
All data processing statistics, resulting mtz files and some log files are available though the ISPYB interface.